Welcome to the High-frequency MRI database documentation
=========================================================

The high-frequency MRI database is a repeated-measure study that collects multiple
microstructural MRI data with a high number of MRI acquisitions over a short period
of time in healthy subjects. This dataset was designed to optimize a relevant
assessment of the consistency of different brain MRI measurements.

The tools described and used are developed by the Sherbrooke Connectivity Imaging Lab (`SCIL`_).

.. _SCIL: http://scil.usherbrooke.ca/en/


   Edde M., Theaud G., Dumont M., Théberge A., Valcourt-Caron A., Gilbert G.,Houde J.C., Maltais L., Rheault F.,
   Spagnolo F., Barakovic M., Magon S. and Descoteaux M.
   High-frequency longitudinal white matter diffusion- & myelin-based MRI database: reliability and variability,
   currently.
   https://onlinelibrary.wiley.com/doi/10.1002/hbm.26310

   :download:`PDF<./download/Edde2023_HBM_HighFrequencyLongitudinal.pdf>`

.. toctree::
   :maxdepth: 1
   :caption: Data

   data/overview
   data/data_description

.. toctree::
   :maxdepth: 1
   :caption: Pipeline

   pipeline/mri_processing
   pipeline/common_space
   pipeline/bundles
   pipeline/fiber_population
   pipeline/consistency_analysis

.. toctree::
   :maxdepth: 1
   :caption: Results

   results/average_maps
   results/bundles_reproductibility
   results/correlation
   results/measure
   results/consistency
   results/fiber_population_measures
   results/fiber_population_consistency

.. toctree::  
   :maxdepth: 1
   :caption: Download

   download/download_data